Manuscripts in Review
Yu, Y., *Hayir, E., Tenenholtz, N., Mackey, L., Wei, Y., Alvarez-Melis, D., Amini, A. P., Lu, A. X. (2025). Causal integration of chemical structures improves representations of microscopy images for morphological profiling. (submitted to PLOS Computational Biology)
*Hayir, E., Crawford, L., Lu, A. X., (2025). MorphoBench: A Comprehensive Benchmark for Evaluating Representation Learning for Cell Painting Assays.